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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs5744230 chr11:112034062 T/TA 3.31E-5 488 16.17 16.3 12.37 KM Plot
THCA rs5744249 chr11:112025306 A/C 2.78E-5 489 16.13 16.23 11.38 KM Plot
THCA rs5744256 chr11:112022848 A/G 2.79E-5 489 15.97 16.27 11.38 KM Plot
THCA rs5744258 chr11:112021767 C/G 2.79E-5 488 15.97 16.3 11.38 KM Plot
THCA rs5744276 chr11:112016871 C/G 2.9E-5 483 16.4 16.27 11.38 KM Plot
THCA rs5744292 chr11:112014136 T/C 2.87E-5 484 16.52 16.07 11.38 KM Plot
THCA rs57446906 chr10:11803950 G/A 3.58E-5 486 16.2 14.45 10.93 KM Plot
THCA rs57459746 chr3:139259212 A/G 3.39E-5 489 15.9 17.03 13.08 KM Plot
THCA rs57469308 chr12:9435632 CAT/C 0.000266 483 15.3 17 16.82 KM Plot
THCA rs5748845 chr22:17545859 C/T 3.21E-5 490 15.9 15.65 27.47 KM Plot
THCA rs57562692 chr11:93884343 T/A 8.93E-5 479 15.23 17.17 10.5 KM Plot
THCA rs57620400 chr10:81848747 GTTTCA/G 0.000212 488 15.9 17.23 9.77 KM Plot
THCA rs57634270 chr19:43554401 T/G 0.000235 490 15.3 18.3 10.08 KM Plot
THCA rs57643421 chr1:91743432 T/C 8.7E-6 484 15.67 17.08 17.77 KM Plot
THCA rs57681416 chr3:111281176 C/T 2.65E-8 483 16.3 14.03 9.15 KM Plot